PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3K0PR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 378aa    MW: 42293.4 Da    PI: 5.855
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3K0PRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.41.5e-19189285194
                  EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                  f+k+l++sdv++++r+vlpkk ae++   ++++e++ +++ d++g  +W++k+++  +++s++yvl+ ++ eFv+a+ L+ gD+++ +  ++ ++ ++
  Araip.3K0PR 189 FQKELKNSDVSSLRRMVLPKKAAEAFlpPLESKEGILISMDDLDGiHVWSFKYRFwpNNNSRMYVLE-NTGEFVNAHALRMGDSIMVY--QDsQNHNY 283
                  99**************************66677999*****************9989999999***9.******************99..44244445 PP

                  EE CS
           B3  93 vv 94 
                  v+
  Araip.3K0PR 284 VI 285
                  55 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.108.3E-28183293IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.49E-21187286IPR015300DNA-binding pseudobarrel domain
CDDcd100171.91E-25187289No hitNo description
SMARTSM010192.4E-19189291IPR003340B3 DNA binding domain
PROSITE profilePS508639.601189291IPR003340B3 DNA binding domain
PfamPF023622.5E-16189286IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MMMDQGQGRE NLLLQKTEAC AFVAGVDAHD LLPSSVTVQG NNTNTNRIIT TTILHNGSSS  60
EPGRILHHHD IQYQQEQEQE QEVGLVATFG NVHRKRRMAR MRRRSSPTLM HLQFHANTTT  120
PTTTLFPPLS SSRQSSDTPP PPPPTLSPPP PLLLPSAAVA PSTTTNTSPH VPTHNPARVI  180
DHTNLRFLFQ KELKNSDVSS LRRMVLPKKA AEAFLPPLES KEGILISMDD LDGIHVWSFK  240
YRFWPNNNSR MYVLENTGEF VNAHALRMGD SIMVYQDSQN HNYVIQAKKA SDQDEFMEET  300
SDMANDIFLN DYEVSKPGCF SLTYPALNDT AGMSFIYETT FSNDSPLDFL GGSMTNFSRI  360
GPTETFGSVE NLSLDDFY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4202840.0JX420284.1 Arachis hypogaea FUSCA3 (FUS3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162034.10.0PREDICTED: B3 domain-containing transcription factor FUS3-like
SwissprotQ9LW313e-81FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A075BHT20.0A0A075BHT2_ARAHY; FUSCA3
STRINGGLYMA16G05480.21e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98582838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.15e-82B3 family protein